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HLA » Haplotype Frequency Search
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| Line | Haplotype | Population | Frequency (%) | Sample Size | Location |
|---|---|---|---|---|---|
| 1 | A*32:01-B*41-DRB1*10:01-DQB1*05:01 | Tunisia Ghannouch | 5.50 | 82 | 33_3_N_10_20_E |
| 2 | A*02-B*41-DRB1*10-DQB1*05 | Mexico Colima Rural | 1.14 | 43 | 19_30_N_103_37_W |
| 3 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Durango, Durango city | 0.65 | 153 | 24_1_N_104_39_W |
| 4 | A*01:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | USA NMDP Hawaiian or other Pacific Islander | 0.59 | 11,499 | 38_45_N_76_6_W |
| 5 | A*24-B*41-DRB1*10-DQB1*05 | Mexico San Luis Potosi Rural | 0.57 | 87 | 21_20_N_98_58_W |
| 6 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Nuevo Leon Rural | 0.57 | 439 | 25_37_N_100_14_W |
| 7 | A*36-B*41-DRB1*10-DQB1*05 | Mexico Sinaloa Rural | 0.55 | 183 | 25_21_N_107_33_W |
| 8 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Tlaxcala Rural | 0.48 | 830 | 19_14_N_98_20_W |
| 9 | A*02-B*41-DRB1*10-DQB1*05 | Mexico Zacatecas, Fresnillo | 0.48 | 103 | 23_10_N_102_52_W |
| 10 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Tamaulipas Rural | 0.40 | 125 | 22_23_N_97_56_W |
| 11 | A*02-B*41-DRB1*10-DQB1*05 | Mexico Mexico City Metropolitan Area Rural | 0.33 | 150 | 19_7_N_98_45_W |
| 12 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Michoacan Rural | 0.29 | 348 | 19_38_N_101_38_W |
| 13 | A*01:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | Colombia Bogotá Cord Blood | 0.24 | 1,463 | 4_39_N_73_52_W |
| 14 | A*29-B*41-DRB1*10-DQB1*05 | Mexico Chihuahua Rural | 0.21 | 236 | 27_18_N_107_53_W |
| 15 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Puebla Rural | 0.18 | 833 | 19_57_N_97_38_W |
| 16 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Durango Rural | 0.15 | 326 | 26_41_N_103_44_W |
| 17 | A*24:02-B*41:01-DRB1*10:01-DQB1*05:01 | Mexico Mexico City Tlalpan | 0.15 | 330 | 19_25_N_99_8_W |
| 18 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Puebla, Puebla city | 0.13 | 1,994 | 19_2_N_98_12_W |
| 19 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Coahuila, Torreon | 0.13 | 396 | 25_32_N_103_24_W |
| 20 | A*68-B*41-DRB1*10:01-DQA1*01:01-DQB1*05:01 | Brazil Paraná Caucasian | 0.08 | 641 | 23_25_S_51_55_W |
| 21 | A*01:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | Spain (Catalunya, Navarra, Extremadura, Aaragón, Cantabria, | 0.07 | 4,335 | 41_22_N_2_11_E |
| 22 | A*66:01-B*41:02-C*17:01-DRB1*10:01-DQB1*05:01 | USA African American pop 4 | 0.04 | 2,411 | 44_58_N_93_15_W |
| 23 | A*24:02-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | Germany DKMS - Italy minority | 0.04 | 1,159 | 48_31_N_9_3_E |
| 24 | A*01-B*41-DRB1*10-DQB1*05 | Mexico Jalisco, Guadalajara city | 0.04 | 1,189 | 20_39_N_103_20_W |
| 25 | A*01:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | Germany DKMS - Turkey minority | 0.03 | 4,856 | 48_31_N_9_3_E |
| 26 | A*01:01:01:01-B*41:01:01-C*17:01:01-DRB1*10:01:01-DQB1*05:01 | Russia Nizhny Novgorod, Russians | 0.03 | 1,510 | 56_19_N_43_59_E |
| 27 | A*02:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | Germany DKMS - Turkey minority | 0.03 | 4,856 | 48_31_N_9_3_E |
| 28 | A*03:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | Germany DKMS - Turkey minority | 0.02 | 4,856 | 48_31_N_9_3_E |
| 29 | A*01:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | USA Hispanic pop 2 | 0.01 | 1,999 | 44_58_N_93_15_W |
| 30 | A*30:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | USA Hispanic pop 2 | 0.01 | 1,999 | 44_58_N_93_15_W |
| 31 | A*32:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 32 | A*01:01-B*41:01-C*07:01-DRB1*10:01-DQB1*05:01 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 33 | A*24:07-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | USA Asian pop 2 | 0.01 | 1,772 | 44_58_N_93_15_W |
| 34 | A*32:01-B*41:01-C*17:01-DRB1*10:01-DQB1*05:01 | USA Asian pop 2 | 0.01 | 1,772 | 44_58_N_93_15_W |
| 35 | A*33:03-B*41:01-C*07:01-DRB1*10:01-DQB1*05:01 | USA African American pop 4 | 0.01 | 2,411 | 44_58_N_93_15_W |
| 36 | A*02:05-B*41:01-C*07:01-DRB1*10:01-DQB1*05:01 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 37 | A*66:01-B*41:02-C*17:01-DRB1*10:01-DQB1*05:01 | Germany DKMS - Turkey minority | 0.01 | 4,856 | 48_31_N_9_3_E |
| 38 | A*02:01:01-B*41:01:01-C*17:01:01-DRB1*10:01:01-DQB1*05:01:01 | Poland BMR | 0.01 | 23,595 | 52_0_N_19_22_E |
| 39 | A*66:01:01-B*41:02:01-C*17:03-DRB1*10:01:01-DQB1*05:01:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 40 | A*31:01:02-B*41:01:01-C*17:01:01-DRB1*10:01:01-DQB1*05:01:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 41 | A*68:01:02-B*41:01:01-C*17:01:01-DRB1*10:01:01-DQB1*05:01:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
| 42 | A*23:01:01-B*41:02:01-C*17:03-DRB1*10:01:01-DQB1*05:01:01 | Poland BMR | 0.00 | 23,595 | 52_0_N_19_22_E |
Allele frequency net database (AFND) 2020 update: gold-standard data classification, open access genotype data and new query tools
Gonzalez-Galarza FF, McCabe A, Santos EJ, Jones J, Takeshita LY, Ortega-Rivera ND, Del Cid-Pavon GM, Ramsbottom K, Ghattaoraya GS, Alfirevic A, Middleton D and Jones AR Nucleic Acid Research 2020, 48:D783-8.
Liverpool, U.K.
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